dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00786
Location and strand information: 99663 - 100958 (+)
Family: GH5|GH5_2|CBM2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.1598
Protein molecular weight: 46665.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00787
Location and strand information: 100960 - 101463 (+)
Family: null
Protein type: null
Protein description: Transcription elongation factor GreA

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00788
Location and strand information: 101575 - 103773 (+)
Family: GH3
Protein type: CAZyme
Protein description: Thermostable beta-glucosidase B
Protein isoelectric point: 6.2774
Protein molecular weight: 82053.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00789
Location and strand information: 103973 - 104608 (+)
Family: NUDIX
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00790
Location and strand information: 104703 - 105023 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00791
Location and strand information: 105330 - 107624 (-)
Family: GH31
Protein type: CAZyme
Protein description: Alpha-xylosidase
Protein isoelectric point: 5.0846
Protein molecular weight: 86498.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00792
Location and strand information: 107825 - 109645 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00793
Location and strand information: 109766 - 111595 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00794
Location and strand information: 111912 - 113363 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00795
Location and strand information: 113375 - 114337 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00796
Location and strand information: 114425 - 116134 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00797
Location and strand information: 116275 - 116895 (+)
Family: 9.B.28.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00798
Location and strand information: 116895 - 119705 (+)
Family: GH5|GH5_4|CBM2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.1879
Protein molecular weight: 102420.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00799
Location and strand information: 119977 - 121530 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00800
Location and strand information: 121595 - 122455 (-)
Family: null
Protein type: null
Protein description: 5'-3' exoribonuclease

Gene clsuter ID: MGYG000002609_5|CGC3
Gene ID: MGYG000002609_00801
Location and strand information: 122642 - 124300 (+)
Family: 3.A.1.121.4
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YbiT

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002609_00786	GH5_e32\|CBM2_e45\|3.2.1.4\|3.2.1.-	beta-mannan\|beta-glucan
MGYG000002609_00788	GH3_e145
MGYG000002609_00791	GH31_e0\|3.2.1.177	xyloglucan
MGYG000002609_00798	GH5_e201\|CBM2_e53\|3.2.1.4\|3.2.1.151	xyloglucan\|beta-glucan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-glucan|xyloglucan

Substrate predicted by dbCAN-PUL is xyloglucan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002609_00786	hypothetical protein	CAZyme	99663	100958	+	GH5\| GH5_2\| CBM2
MGYG000002609_00787	Transcription elongation factor GreA	null	100960	101463	+	GreA_GreB_N\| GreA_GreB
MGYG000002609_00788	Thermostable beta-glucosidase B	CAZyme	101575	103773	+	GH3
MGYG000002609_00789	hypothetical protein	STP	103973	104608	+	NUDIX
MGYG000002609_00790	hypothetical protein	null	104703	105023	+	No domain
MGYG000002609_00791	Alpha-xylosidase	CAZyme	105330	107624	-	GH31
MGYG000002609_00792	hypothetical protein	TC	107825	109645	+	8.A.59.2.1
MGYG000002609_00793	hypothetical protein	null	109766	111595	+	No domain
MGYG000002609_00794	hypothetical protein	TC	111912	113363	+	3.A.1.1.10
MGYG000002609_00795	L-arabinose transport system permease protein AraQ	TC	113375	114337	+	3.A.1.1.29
MGYG000002609_00796	hypothetical protein	null	114425	116134	+	SBP_bac_8
MGYG000002609_00797	hypothetical protein	TC	116275	116895	+	9.B.28.1.2
MGYG000002609_00798	hypothetical protein	CAZyme	116895	119705	+	GH5\| GH5_4\| CBM2
MGYG000002609_00799	Chemotaxis response regulator protein-glutamate methylesterase	TF	119977	121530	+	HTH_AraC+HTH_AraC
MGYG000002609_00800	5'-3' exoribonuclease	null	121595	122455	-	PHP
MGYG000002609_00801	putative ABC transporter ATP-binding protein YbiT	TC	122642	124300	+	3.A.1.121.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature